Published papers

Cryopreservation and revival of Hawaiian stony corals using isochoric vitrification

Powell-Palm, Matthew J; Henley, E Michael; Consiglio, Anthony N; Lager, Claire; Chang, Brooke; Perry, Riley; Fitzgerald, Kendall; Daly, Jonathan; Rubinsky, Boris; Hagedorn, Mary (2023)

Nature Communications

Abstract

Corals are under siege by both local and global threats, creating a worldwide reef crisis. Cryopreservation is an important intervention measure and a vital component of the modern coral conservation toolkit, but preservation techniques are currently limited to sensitive reproductive materials that can only be obtained a few nights per year during spawning. Here, we report the successful cryopreservation and revival of cm-scale coral fragments via mL-scale isochoric vitrification. We demonstrate coral viability at 24 h post-thaw using a calibrated oxygen-uptake respirometry technique, and further show that the method can be applied in a passive, electronics-free configuration. Finally, we detail a complete prototype coral cryopreservation pipeline, which provides a platform for essential next steps in modulating post-thaw stress and initiating long-term growth. These findings pave the way towards an approach that can be rapidly deployed around the world to secure the biological genetic diversity of our vanishing coral reefs.

A burning issue: The effect of organic ultraviolet filter exposure on the behaviour and physiology of Daphnia magna

Boyd, Aaron; Stewart, Connor B; Philibert, Danielle A; How, Zuo Tong; El-Din, Mohamed Gamal; Tierney, Keith B; Blewett, Tamzin A (2021)

Science of the Total Environment

Abstract

Ultraviolet (UV) filters are compounds utilized in many manufacturing processes and personal care products such as sunscreen to protect against UV-radiation. These highly lipophilic compounds are emerging contaminants of concern in aquatic environments due to their previously observed potential to bioaccumulate and exert toxic effects in marine ecosystems. Currently, research into the toxic effects of UV filter contamination of freshwater ecosystems is lacking, thus the present study sought to model the effects of acute and chronic developmental exposures to UV filters avobenzone, oxybenzone and octocrylene as well as a mixture of these substances in the freshwater invertebrate, Daphnia magna, at environmentally realistic concentrations. Median 48-hour effect and lethal concentrations were determined to be in the low mg/L range, with the exception of octocrylene causing 50% immobilization near environmental concentrations. 48-hour acute developmental exposures proved to behaviourally impair daphnid phototactic response; however, recovery was observed following a 19-day post-exposure period. Although no physiological disruptions were detected in acutely exposed daphnids, delayed mortality was observed up to seven days post-exposure at 200 μg/L of avobenzone and octocrylene. 21-day chronic exposure to 7.5 μg/L octocrylene yielded complete mortality within 7 days, while sublethal chronic exposure to avobenzone increased Daphnia reproductive output and decreased metabolic rate. 2 μg/L oxybenzone induced a 25% increase in metabolic rate of adult daphnids, and otherwise caused no toxic effects at this dose. These data indicate that UV filters can exert toxic effects in freshwater invertebrates, therefore further study is required. It is clear that the most well-studied UV filter, oxybenzone, may not be the most toxic to Daphnia, as both avobenzone and octocrylene induced behavioural and physiological disruption at environmentally realistic concentrations.

Selection for Postponed Senescence in Drosophila melanogaster Reveals Distinct Metabolic Aging Trajectories Modifiable by the Angiotensin‐Converting Enzyme Inhibitor Lisinopril

Vecchié, Denise; Anholt, Robert RH; Mackay, Trudy FC; De Luca, Maria (2026)

Aging Cell

Abstract

Aging is accompanied by profound changes in energy metabolism, yet the underlying drivers and modulators of these shifts remain incompletely understood. Here, we investigated how life‐history evolution shapes metabolic aging and pharmacological responsiveness by leveraging Drosophila melanogaster lines divergently selected for reproductive timing. We measured organismal oxygen consumption rate and performed untargeted metabolomics in young and old flies of both sexes from long‐lived “O” lines (selected for female late‐life reproduction) and unselected “B” control lines. Males and females from the O lines maintained stable metabolic rates and largely preserved metabolite profiles with age, whereas B line flies showed age‐related increases in oxygen consumption, citrate accumulation, and elevated levels of medium‐ and long‐chain fatty acids, hallmarks of mitochondrial inefficiency and impaired lipid oxidation. Aged B flies also displayed elevated S‐adenosylmethionine, reduced sarcosine, and diminished heme levels, indicating dysregulation of one‐carbon metabolism and impaired heme biosynthesis. Furthermore, Vitamin B6 metabolites, pyridoxamine, pyridoxal, and 4‐pyridoxate, increased with aging only in B line females. Motivated by evidence implicating the renin‐angiotensin system in metabolic aging, we treated flies with the angiotensin‐converting enzyme (ACE) inhibitor lisinopril. Lisinopril prevented the age‐related rise in metabolic rate in B line females, aligning their metabolic phenotype with that of O line flies. This suggests that ACE inhibition may buffer against age‐associated increases in metabolic rate and contribute to enhanced metabolic stability. Our results show that selection for delayed reproduction and increased lifespan modifies age‐related metabolic trajectories and modulates physiological responses to pharmacological intervention.

The Impact of the Angiotensin-Converting Enzyme Inhibitor Lisinopril on Metabolic Rate in Drosophila melanogaster

Vecchie’, Denise; Wolter, Julia M; Perry, Jesse; Jumbo-Lucioni, Patricia; De Luca, Maria (2024)

International Journal of Molecular Sciences

Abstract

Evidence suggests that angiotensin-converting enzyme inhibitors (ACEIs) may increase metabolic rate by promoting thermogenesis, potentially through enhanced fat oxidation and improved insulin. More research is, however, needed to understand this intricate process. In this study, we used 22 lines from the Drosophila Genetic Reference Panel to assess the metabolic rate of virgin female and male flies that were either fed a standard medium or received lisinopril for one week or five weeks. We demonstrated that lisinopril affects the whole-body metabolic rate in Drosophila melanogaster in a genotype-dependent manner. However, the effects of genotypes are highly context-dependent, being influenced by sex and age. Our findings also suggest that lisinopril may increase the Drosophila metabolic rate via the accumulation of a bradykinin-like peptide, which, in turn, enhances cold tolerance by upregulating Ucp4b and Ucp4c genes. Finally, we showed that knocking down Ance, the ortholog of mammalian ACE in Malpighian/renal tubules and the nervous system, leads to opposite changes in metabolic rate, and that the effect of lisinopril depends on Ance in these systems, but in a sex- and age-specific manner. In conclusion, our results regarding D. melanogaster support existing evidence of a connection between ACEI drugs and metabolic rate while offering new insights into this relationship.

Developmental defects in cognition, metabolic and cardiac function following maternal exposures to low environmental levels of selective serotonin re-uptake inhibitors and tributyltin in Daphnia magna

Moro, Hugo; Raldúa, Demetrio; Barata, Carlos (2024)

Science of the Total Environment

Abstract

Aquatic organisms are exposed to low concentrations of neuro-active chemicals, many of them acting also as neuroendocrine disruptors that can be hazardous during earlier embryonic stages. The present study aims to assess how exposure early in live to environmental low concentrations of two selective serotonin reuptake inhibitors (SSRIs), fluoxetine and sertraline, and tributyltin (TBT) affected cognitive, metabolic and cardiac responses in the model aquatic crustacean Daphnia magna. To that end, newly brooded females were exposed for an entire reproductive cycle (3-4 days) and the response of collected juveniles in the first, second and third consecutive broods, which were exposed, respectively, as embryos, provisioned and un-provisioned egg stages, was monitored. Pre-exposure to the selected SSRIs during embryonic and egg developmental stages altered the swimming behaviour of D. magna juveniles to light in a similar way reported elsewhere by serotonergic compounds while TBT altered cognition disrupting multiple neurological signalling routes. The studied compounds also altered body size, the amount of storage lipids in lipid droplets, heart rate, oxygen consumption rates and the transcription of related serotonergic, dopaminergic and lipid metabolic genes in new-born individuals, mostly pre-exposed during their embryonic and provisioning egg stages. The obtained cognitive, cardiac and metabolic defects in juveniles developed from exposed sensitive pre-natal stages align with the "Developmental Origins of Health and Disease (DoHAD)" paradigm.

Are acute and acclimated thermal effects on metabolic rate modulated by cell size? A comparison between diploid and triploid zebrafish larvae

Hermaniuk, Adam; van de Pol, Iris LE; Verberk, Wilco CEP (2021)

Journal of Experimental Biology

Abstract

Being composed of small cells may carry energetic costs related to maintaining ionic gradients across cell membranes as well as benefits related to diffusive oxygen uptake. Here, we test the hypothesis that these costs and benefits of cell size in ectotherms are temperature dependent. To study the consequences of cell size for whole-organism metabolic rate, we compared diploid and triploid zebrafish larvae differing in cell size. A fully factorial design was applied combining three different rearing and test temperatures that allowed us to distinguish acute from acclimated thermal effects. Individual oxygen consumption rates of diploid and triploid larvae across declining levels of oxygen availability were measured. We found that both acute and acclimated thermal effects affected the metabolic response. In comparison with triploids, diploids responded more strongly to acute temperatures, especially when reared at the highest temperature. These observations support the hypothesis that animals composed of smaller cells (i.e. diploids) are less vulnerable to oxygen limitation in warm aquatic habitats. Furthermore, we found slightly improved hypoxia tolerance in diploids. By contrast, warm-reared triploids had higher metabolic rates when they were tested at acute cold temperature, suggesting that being composed of larger cells may provide metabolic advantages in the cold. We offer two mechanisms as a potential explanation of this result, related to homeoviscous adaptation of membrane function and the mitigation of developmental noise. Our results suggest that being composed of larger cells provides metabolic advantages in cold water, while being composed of smaller cells provides metabolic advantages in warm water.

RNA virus-mediated changes in organismal oxygen consumption rate in young and old Drosophila melanogaster males

Hagedorn, Eli; Bunnell, Dean; Henschel, Beate; Smith Jr, Daniel L; Dickinson, Stephanie; Brown, Andrew W; De Luca, Maria; Turner, Ashley N; Chtarbanova, Stanislava (2023)

Aging (Albany NY)

Abstract

Aging is accompanied by increased susceptibility to infections including with viral pathogens resulting in higher morbidity and mortality among the elderly. Significant changes in host metabolism can take place following virus infection. Efficient immune responses are energetically costly, and viruses divert host molecular resources to promote their own replication. Virus-induced metabolic reprogramming could impact infection outcomes, however, how this is affected by aging and impacts organismal survival remains poorly understood. RNA virus infection of Drosophila melanogaster with Flock House virus (FHV) is an effective model to study antiviral responses with age, where older flies die faster than younger flies due to impaired disease tolerance. Using this aged host-virus model, we conducted longitudinal, single-fly respirometry studies to determine if metabolism impacts infection outcomes. Analysis using linear mixed models on Oxygen Consumption Rate (OCR) following the first 72-hours post-infection showed that FHV modulates respiration, but age has no significant effect on OCR. However, the longitudinal assessment revealed that OCR in young flies progressively and significantly decreases, while OCR in aged flies remains constant throughout the three days of the experiment. Furthermore, we found that the OCR signature at 24-hours varied in response to both experimental treatment and survival status. FHV-injected flies that died prior to 48- or 72-hours measurements had a lower OCR compared to survivors at 48-hours. Our findings suggest the hostâs metabolic profile could influence the outcome of viral infections.

Modulation of PFOA (perfluorooctanoic acid) uptake in Daphnia (Daphnia magna) by TiO2 nanoparticles

Farajizadeh, Arian; Siu, Lazarus; Wong, Jonas; Goss, Greg G (2025)

Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology

Abstract

The hydrophobic surface of plastics adsorbs hydrophobic persistent organic pollutants (POP) such as Perfluorooctanoic acid (PFOA). The potential for hydrophobic nanoparticles such as titanium dioxide (TiO 2 ) to associate with PFOA and alter accumulation rates has not been investigated. Nanoparticles form ecocorona by adsorption of multiple constituents in water, but few studies have examined if this results in differences in the rate of PFOA accumulation in freshwater animals. We demonstrate the PFOA associates with the hydrophobic surfaces of nano-sized TiO 2 particles and this increases the rate of uptake of PFOA into Daphnia magna. Accumulation of PFOA in daphnia was measurement over multiple concentrations, flux times and particle sizes using a radiotracer-based method ( 14 C-labelled PFOA). Our results show that TiO 2 NPs have a high sorption capacity for PFOA and PFOA sorption decreased aggregation of TiO 2 as evidenced by a decrease in average hydrodynamic diameter, decreased zeta potential and increased polydispersity index. Uptake of PFOA at 10 μg/L was found to be 45 % higher in the presence of 500 μg/L of 5 nm TiO 2 compared to control PFOA alone uptake. Potentiation of PFOA uptake using 25 nm TiO 2 NPs was 25 % higher than control PFOA alone. PFOA alone (0.5 mg/L) reduced metabolic oxygen consumption (MO 2 ) in daphnia by 52 %, but exposure to (100 mg/L) 5 nm TiO 2 NPs sorbed with (0.5 mg/L) PFOA decreased metabolic oxygen consumption (MO 2 ) by ~88 %. These findings show that TiO 2 nanoparticles act as vectors for hydrophobic organic pollutant accumulation and significantly potentiate PFOA accumulation and toxicity in aquatic organisms.

Molecular consequences of mitochondrial replacement may be masked from organismal traits in Tigriopus californicus

Denova, Jacob R; Flanagan, Ben A; Jah, Murad; Applebaum, Scott L; Edmands, Suzanne (2025)

Plos one

Assessing the Acute and Chronic Effects of Palladium on Daphnia magna and the Influence of Natural Organic Matter

Boukhari, Rania; Ponton, Dominic E; Rosabal, Maikel; Mueller, Kristin K; Amyot, Marc (2025)

Journal of Applied Toxicology

Ecotoxicological assessment of wastewater treated by the novel solar chlor-photo-Fenton process for sustainable crop irrigation

Belachqer-El Attar, S; Taborelli, P; Soriano-Molina, P; Roslev, P; Pérez, JA Sánchez (2026)

Journal of Environmental Management

Abstract

Potential ecotoxicity of the solar chlor-photo-Fenton (SCPF) process as a novel approach for wastewater reclamation has been investigated in relation to reuse for crop irrigation. Several secondary effluents from wastewater treatment plants across different geolocations were treated by applying the process with low reagent concentrations of 0.1 mM of ferric nitrilotriacetate (Fe 3+ -NTA), 0.73 mM of hydrogen peroxide, at different chlorine doses ranging from 0.13 to 0.40 mM. Chlorination, using comparable chlorine concentrations, and the solar photo-Fenton process were evaluated in parallel to compare with SCPF. A UVB-LED system was also used to perform the SCPF treatment, demonstrating its adaptability to both solar and artificial light-driven applications. Potential environmental toxicity was assessed using a battery of bioassays, including bacterial toxicity and genotoxicity, phytotoxicity in algae and plants, and toxicity toward mixed microbial communities (microrespirometry). Water treated with SCPF exhibited minimal bacterial and algal toxicity (<13 %), low phytotoxicity as assessed by plant germination (35 % at high chlorine concentration) and shoot/root elongation (22 % and -30 %), low toxicity toward mixed microbial communities (<30 %), and low apparent levels of genotoxicity. In comparison, chlorination yielded higher ecotoxic responses across the bioassays, suggesting that SCPF may mitigate these adverse effects. Although Fe 3+ -NTA dissolution showed toxicity its ecotoxic impact was markedly reduced at the operational concentration of 0.1 mM used in SCPF. These results indicate that chlor-photo-Fenton can produce treated water with low apparent ecotoxicity, supporting its potential as an environmentally friendly and scalable solution for wastewater treatment and reuse.

Life-history traits and acclimation ability of a copepod species from the dripping waters of the Corchia Cave (Apuan Alps, Tuscany, Italy)

Di Lorenzo, Tiziana; Galassi, Diana Maria Paola; Tabilio Di Camillo, Agostina; Pop, Maria Mirabela; Iepure, Sanda; Piccini, Leonardo (2023)

Water

The hard life of an octopus embryo is seen through gene expression, energy metabolism, and its ability to neutralize radical oxygen species

Ramos-Rodríguez, Sadot; Ortega-Ramírez, Karen; Méndez-Can, Luisa; Galindo-Sánchez, Clara; Galindo-Torres, Pavel; Ventura-López, Claudia; Mascaro, Maite; Caamal-Monsreal, Claudia; Rodríguez, Gabriela; Díaz, Fernando (2024)

Scientific Reports

Metabolic rate and tolerance to hypoxia in the harpacticoid copepod Amphiascoides atopus

García-Bernal, Aarón; Vargas-Abúndez, Jorge Arturo; Llera-Herrera, Raúl; Racotta, Ilie S; Rosas, Carlos (2026)

Journal of Experimental Marine Biology and Ecology

Novel high‐throughput oxygen saturation measurements for quantifying the physiological performance of macroalgal early life stages

Veenhof, RJ; Coleman, MA; Champion, Curtis; Dworjanyn, SA; Venhuizen, R; Kearns, Lydia; Marzinelli, Ezequiel M; Pettersen, AK (2024)

Journal of phycology

Abstract

Understanding how macroalgal forests will respond to environmental change is critical for predicting future impacts on coastal ecosystems. Although measures of adult macroalgae physiological responses to environmental stress are advancing, measures of early life‐stage physiology are rare, in part due to the methodological difficulties associated with their small size. Here we tested a novel, high‐throughput method (rate of oxygen consumption and production; V̇O2 via a sensor dish reader microplate system to rapidly measure physiological rates of the early life stages of three habitat‐forming macroalgae, the kelp Ecklonia radiata and the fucoids Hormosira banksii and Phyllospora comosa. We measured the rate of O2 consumption (respiration) and O2 production (net primary production) to then calculate gross primary production (GPP) under temperatures representing their natural thermal range. The V̇O2 microplate system was suitable for rapidly measuring physiological rates over a temperature gradient to establish thermal performance curves for all species. The V̇O2 microplate system proved efficient for measures of early life stages of macroalgae ranging in size from approximately 50 μm up to 150 mm. This method has the potential for measuring responses of early life stages across a range of environmental factors, species, populations, and developmental stages, vastly increasing the speed, precision, and efficacy of macroalgal physiological measures under future ocean change scenarios.

Sex differences in stress response in the marine copepod, Calanus finmarchicus

Rousseau, Sidonie; Ameur, Wassim; Thiebaut, Elise; Hafez, Tamer; Altin, Dag; Hansen, Bjørn Henrik; Yap, Kang Nian (2025)

American Journal of Physiology-Regulatory, Integrative and Comparative Physiology

Abstract

This individual-based study reveals sex-specific differences in stress responses of the copepod Calanus finmarchicus to oxidative stress, with males showing higher sensitivity but no significant different metabolic strategies compared with females. It also identifies the antagonistic and synergistic effects of heat and paraquat-induced oxidative stress on antioxidant gene expression, and a potential maximum threshold for superoxide dismutase and catalase fold change in females.

Temperature-induced metabolic performance in early life stages of two brachyuran crabs

van der Walt, Kerry-Ann; Reddy, Seshnee; Knights, Antony M; Firth, Louise B; Porri, Francesca (2025)

Journal of Thermal Biology

Intertidal copepod Tigriopus californicus displays multilevel variation in tolerance to extended bouts of hypoxia

Powers, Matthew J; Schmitz, Ella K; Olvera-Alegria, Samantha; Barreto, Felipe S (2025)

Marine Ecology Progress Series

Shifts and critical periods in coral metabolism reveal energetic vulnerability during development

Huffmyer, Ariana S; Wong, Kevin H; Becker, Danielle M; Strand, Emma; Mass, Tali; Putnam, Hollie M (2025)

Current Biology

Thermal responses in the Hawaiian volcano shrimp (Halocaridina rubra): active vs. passive plasticity across genetic lineages

Correa-Orellana, Mariangel; Romero, Ash; Zwonitzer, Kendra D; Sakihara, Troy S; Hawk, Cassidy; Nguyen, Alice T; Iverson, Erik NK; Havird, Justin C (2025)

Journal of Thermal Biology

Multi-endpoint assessment of tunnel wash water and tyre-particle leachate in zebrafish larvae

Varshney, Shubham; Ramaghatta, Chinmayi; Siriyappagouder, Prabhugouda; Booth, Andy M; Sørensen, Lisbet; Olsvik, Pål A (2025)

Toxicology Reports

Extreme temperature events directly and indirectly mediate evolutionary adaptation of zooplankton metabolic rate

Ruiz, Thomas; Kainz, Martin J (2025)

Limnology and Oceanography

The breeding zone in a colonial marine invertebrate influences larval sensitivity to low oxygen at a micro-spatial scale

Lagos, Marcelo E; Albarrán-Mélzer, Natalia; Gaitán-Espitia, Juan Diego (2025)

Proc. R. Soc. B

Are standard test species still relevant? A comprehensive assessment of Daphnia pulex reared in laboratory and wild environments and their responses to organic ultraviolet filters

Boyd, Aaron; Stewart, Connor B; McCuaig, Jenelle D; Martin, Sidney; Legge, Ally; Doty, Dustin; Mitchelmore, Carys L; Blewett, Tamzin A (2025)

Environmental Toxicology and Chemistry

The Evolutionary Loss of Paternal Care Is Associated With Shifts in Female Life‐History Traits

Behrens, Colby; Young, Sarah; Arredondo, Eric; Dalziel, Anne C; Weir, Laura K; Bell, Alison M (2025)

Ecology and Evolution

Hypoxia Disrupts Sex‐Specific Physiology and Gene Expression Leading to Decreased Fitness in the Estuarine Sea Anemone Nematostella vectensis

Glass, Benjamin H; Ye, Angela C; Hemphill, Cassidy N; Jones, Katelyn G; Dworetzky, Anna G; Barott, Katie L (2025)

Molecular Ecology

Comparing small and large genomes within monogonont rotifers

Mohl, Jonathon E; Brown, Patrick D; Robbins, Aaron J; Lavretsky, Philip; Hochberg, Rick; Wallace, Robert L; Walsh, Elizabeth J (2025)

Genome Biology and Evolution

Down to size: Exploring the influence of plastic particle Dimensions on physiological and nervous responses in early-stage zebrafish

Oger, Mathilde JL; Vermeulen, Océane; Lambert, Jérôme; Madanu, Thomas L; Kestemont, Patrick; Cornet, Valérie (2024)

Environmental Pollution

Impacts of UV light on the effects of either conventional or nano-enabled azoxystrobin on Daphnia magna

Lari, Ebrahim; Elahi, Zahra; Wong, Jonas; Bluhm, Kerstin; Brinkmann, Markus; Goss, Greg (2024)

Chemosphere

Temperature-dependent hypoxia tolerance of purple sea urchin Strongylocentrotus purpuratus across biogeography and ontogeny

Duncan, Murray I; Micheli, Fiorenza; Marquez, J Andres; Lowe, Christopher J; Hamilton, Scott L; Sperling, Erik A (2024)

Marine Ecology Progress Series

Multiple stressors affecting microbial decomposer and litter decomposition in restored urban streams: Assessing effects of salinization, increased temperature, and reduced flow velocity in a field mesocosm experiment

David, Gwendoline M; Pimentel, Iris Madge; Rehsen, Philipp M; Vermiert, Anna-Maria; Leese, Florian; Gessner, Mark O (2024)

Science of the Total Environment

Scaling of respiration in colonial invertebrates

Brown, Patrick D; Walsh, Elizabeth J (2024)

Limnology and Oceanography

Are UV filters better together? A comparison of the toxicity of individual ultraviolet filters and off-the-shelf sunscreens to Daphnia magna

Boyd, A; Martin, S; Legge, A; Blewett, TA (2024)

Environmental Pollution

Genetics of Physiological Variation Within and Between Larval Wild-Type AB and Backcrossed NHGRI-1 Zebrafish (Danio rerio)

Martinez-Bautista, Gil; Cartee, Moira Ryann; Kunder, Dyuksha; Lee, Crystelle; Tang, Karol; Nagarajan, Neha; Padilla, Pamela; Burggren, Warren (2025)

Fishes

Altered phenotypic responses of asexual Arctic Daphnia after 10 years of rapid climate change

Karapli-Petritsopoulou, Athina; Heckelmann, Jasmin Josephine; Becker, Dörthe; Anderson, N John; Frisch, Dagmar (2024)

EcoEvoRxiv

Exploring the role of body mass in temperature-driven changes in metabolic rates of Arctic copepods

Karlsson, Konrad; Søreide, Janne E (2024)

ICES Journal of Marine Science

Oxygen Consumption and Carbon Budget in Groundwater-Obligate and Surface-Dwelling Diacyclops Species (Crustacea Copepoda Cyclopoida) Under Temperature Variability

Di Lorenzo, Tiziana; Tabilio Di Camillo, Agostina; Iepure, Sanda; Galassi, Diana MP; Mori, Nataša; Simčič, Tatjana (2025)

Environments

Evaluation of carp sperm respiration: fluorometry with optochemical oxygen sensor versus polarography

Musatova, Iryna; Dzyuba, Borys; Boryshpolets, Serhii; Iqbal, Azeem; Sotnikov, Anatolii; Kholodnyy, Vitaliy; Dzyuba, Viktoriya (2025)

Fish Physiology and Biochemistry

Coral larvae increase nitrogen assimilation to stabilize algal symbiosis and combat bleaching under increased temperature

Huffmyer, Ariana S; Ashey, Jill; Strand, Emma; Chiles, Eric N; Su, Xiaoyang; Putnam, Hollie M (2024)

PLoS biology

Effects of food supply on northern bay scallops Argopecten irradians reared under two pCO2 conditions

Gurr, Samuel J; McFarland, Katherine; Bernatchez, Genevieve; Dixon, Mark S; Guy, Lisa; Milke, Lisa M; Poach, Matthew E; Hart, Deborah; Plough, Louis V; Redman, Dylan H (2024)

Marine Ecology Progress Series

Effects of Metabolic Disruption on Lipid Metabolism and Yolk Retention in Zebrafish Embryos

van den Boom, Rik; Vergauwen, Lucia; Knapen, Dries (2024)

Environmental Toxicology and Chemistry

Effects of low temperature on growth and metabolism of larval green sturgeon (Acipenser medirostris) across early ontogeny

Lo, Vanessa K; Zillig, Kenneth W; Cocherell, Dennis E; Todgham, Anne E; Fangue, Nann A (2024)

Journal of Comparative Physiology B

Physiological and transcriptomic responses of Aurelia coerulea polyps to acidified seawater conditions

Sun, Tingting; Peng, Saijun; Tu, Fangzheng; Xu, Pengzhen; Ye, Lijing; Zhao, Jianmin; Dong, Zhijun (2024)

Marine Environmental Research

Assessments of carbon nanotubes toxicities in zebrafish larvae using multiple physiological and molecular endpoints

Audira, Gilbert; Lee, Jiann-Shing; Vasquez, Ross D; Roldan, Marri Jmelou M; Lai, Yu-Heng; Hsiao, Chung-Der (2024)

Chemico-Biological Interactions

Enhanced neurotoxic effect of PCB-153 when co-exposed with polystyrene nanoplastics in zebrafish larvae

Varshney, Shubham; Hegstad-Pettersen, Mia M; Siriyappagouder, Prabhugouda; Olsvik, Pål A (2024)

Chemosphere

Temperature and hypoxia trigger developmental phenotypic plasticity of cardiorespiratory physiology and growth in the parthenogenetic marbled crayfish, Procambarus virginalis Lyko, 2017

Göpel, Torben; Burggren, Warren W (2024)

Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology

Evaluation of Tacrolimus’ Adverse Effects on Zebrafish in Larval and Adult Stages by Using Multiple Physiological and Behavioral Endpoints

Feng, Wen-Wei; Chen, Hsiu-Chao; Audira, Gilbert; Suryanto, Michael Edbert; Saputra, Ferry; Kurnia, Kevin Adi; Vasquez, Ross D; Casuga, Franelyne P; Lai, Yu-Heng; Hsiao, Chung-Der (2024)

Biology

Ecotoxicological assessment of Cu-rich acid mine drainage of Sulitjelma mine using zebrafish larvae as an animal model

Varshney, Shubham; Lundås, Mikkel; Siriyappagouder, Prabhugouda; Kristensen, Torstein; Olsvik, Pål A (2024)

Ecotoxicology and Environmental Safety

Intergenerational plasticity aligns with temperature-dependent selection on offspring metabolic rates

Pettersen, Amanda K; Metcalfe, Neil B; Seebacher, Frank (2024)

Philosophical Transactions of the Royal Society B

Acute heat priming promotes short-term climate resilience of early life stages in a model sea anemone

Glass, Benjamin H; Jones, Katelyn G; Angela, C Ye; Dworetzky, Anna G; Barott, Katie L (2023)

PeerJ

Effects of temperature on metabolic rate during metamorphosis in the alfalfa leafcutting bee

Earls, Kayla N; Campbell, Jacob B; Rinehart, Joseph P; Greenlee, Kendra J (2023)

Biology Open

Linking the metabolic rate of individuals to species ecology and life history in key Arctic copepods

Karlsson, Konrad; Søreide, Janne E (2023)

Marine Biology

The Effect of the Pyrethroid Pesticide Fenpropathrin on the Cardiac Performance of Zebrafish and the Potential Mechanism of Toxicity

Saputra, Ferry; Lai, Yu-Heng; Roldan, Marri Jmelou M; Alos, Honeymae C; Aventurado, Charlaine A; Vasquez, Ross D; Hsiao, Chung-Der (2023)

Biology

The effect of chemical dispersion and temperature on the metabolic and cardiac responses to physically dispersed crude oil exposure in larval American lobster (Homarus americanus)

Scovil, Allie M; Boloori, Tahereh; de Jourdan, Benjamin P; Speers-Roesch, Ben (2023)

Marine Pollution Bulletin

Environmental concentrations of tire rubber-derived 6PPD-quinone alter CNS function in zebrafish larvae

Ricarte, Marina; Prats, Eva; Montemurro, Nicola; Bedrossiantz, Juliette; Bellot, Marina; Gómez-Canela, Cristian; Raldúa, Demetrio (2023)

Science of the Total Environment

Early-life exposure to permethrin affects phenotypic traits in both larval and adult mangrove rivulus Kryptolebias marmoratus

Mathiron, Anthony GE; Gallego, Gil; Silvestre, Frédéric (2023)

Aquatic Toxicology

Effects of brood viability and rising temperature on oxygen consumption of freshwater mussel glochidia (Bivalvia: Unionidae)

Fluharty, Ryan S; Abdelrahman, Hisham A; Stoeckel, James A (2023)

Canadian Journal of Zoology

Physiological and morphological plasticity in Stylophora pistillata larvae from Eilat, Israel, to shallow and mesophotic light conditions

Bellworthy, Jessica; Pardo, Rachel; Scucchia, Federica; Zaslansky, Paul; Goodbody-Gringley, Gretchen; Mass, Tali (2023)

iScience

A novel automated method for the simultaneous detection of breathing frequency and amplitude in zebrafish (Danio rerio) embryos and larvae

Kämmer, Nadine; Reimann, Tanja; Ovcharova, Viktoriia; Braunbeck, Thomas (2023)

Aquatic Toxicology

Physiological response of Aurelia coerulea polyps to elevated seasonal temperatures

Sun, Tingting; Luo, Ziyi; Peng, Saijun; Schiariti, Agustin; Du, Chong; Zhao, Jianmin; Dong, Zhijun (2023)

Hydrobiologia

Increased Food Resources Help Eastern Oyster Mitigate the Negative Impacts of Coastal Acidification

Schwaner, Caroline; Barbosa, Michelle; Schwemmer, Teresa G; Pales Espinosa, Emmanuelle; Allam, Bassem (2023)

Animals

Fine scale environmental variability and physiological tolerance influence invertebrate larval communities from a human-impacted mangrove in Hong Kong

Vorsatz, Lyle Dennis; Porri, Francesca; Pattrick, Paula; Cannicci, Stefano (2022)

Regional Environmental Change

Similar metabolic responses of co-occurring post-settlement mussels to temperature change despite distinct geographical distributions

Nel, Aldi; McQuaid, Christopher D; Duna, Olwethu O; Giménez, Luis; Porri, Francesca (2023)

Marine Biology

Carryover effects of environmental stressors influence the life performance of brown trout

Louhi, Pauliina; Pettinau, Luca; Härkönen, Laura S; Anttila, Katja; Huusko, Ari (2023)

Ecosphere

Thermal acclimation and metabolic scaling of a groundwater asellid in the climate change scenario

Di Lorenzo, Tiziana; Reboleira, Ana Sofia PS (2022)

Scientific Reports

Chemical manipulation of mitochondrial function affects metabolism of red carotenoids in a marine copepod (Tigriopus californicus)

Powers, Matthew J; Baty, James A; Dinga, Alexis M; Mao, James H; Hill, Geoffrey E (2022)

Journal of Experimental Biology

Polystyrene Microparticles and the Functional Traits of Invertebrates: A Case Study on Freshwater Shrimp Neocardina heteropoda

Kučera, Jozef; Púček Belišová, Noemi; Mackuľak, Tomáš; Ryba, Jozef; Douda, Karel; Bondarev, Dmitrij; Slavík, Ondrej; Tamáš, Michal; Escobar Calderon, Juan Felipe; Horký, Pavel (2022)

Fishes

Parental exposure to ocean acidification impacts gamete production and physiology but not offspring performance in Nematostella vectensis

Glass, Benjamin H; Schmitt, Angela H; Brown, Kristen T; Speer, Kelsey F; Barott, Katie L (2023)

Biology Open

Physiological costs of facultative endosymbionts in aphids assessed from energy metabolism

Clavé, Corentin; Sugio, Akiko; Morlière, Stéphanie; Pincebourde, Sylvain; Simon, Jean‐Christophe; Foray, Vincent (2022)

Functional Ecology

Toxicity Assessment of an Anti-Cancer Drug of p-Toluene Sulfonamide in Zebrafish Larvae Based on Cardiovascular and Locomotion Activities

Young, Andrew Yau Wah; Audira, Gilbert; Saputra, Ferry; Alos, Honeymae C; Aventurado, Charlaine A; Lai, Yu-Heng; Vasquez, Ross D; Hsiao, Chung-Der; Hung, Chih-Hsin (2022)

Biomolecules

Metabolic phenotype mediates the outcome of competitive interactions in a response‐surface field experiment

Schuster, Lukas; White, Craig R; Marshall, Dustin J (2021)

Ecology and Evolution

Symbiont genotype influences holobiont response to increased temperature

Moffat, Jennica J; Coffroth, Mary Alice; Wallingford, Piper D; terHorst, Casey P (2022)

Scientific Reports

Metabolic responses to crude oil during early life stages reveal critical developmental windows in the zebrafish (Danio rerio)

Roman, Karem N Vazquez; Burggren, Warren W (2022)

Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology

Clownfish larvae exhibit faster growth, higher metabolic rates and altered gene expression under future ocean warming

Moore, Billy; Jolly, Jeffrey; Izumiyama, Michael; Kawai, Erina; Ryu, Taewoo; Ravasi, Timothy (2023)

Science of The Total Environment

Effects of elevated CO2 on metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares)

Heuer, Rachael M; Wang, Yadong; Pasparakis, Christina; Zhang, Wenlong; Scholey, Vernon; Margulies, Daniel; Grosell, Martin (2023)

Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology

Exposure to low environmental copper concentrations does not affect survival and development in Atlantic cod (Gadus morhua) early life stages

Farkas, Julia; Svendheim, Linn H; Jager, Tjalling; Ciesielski, Tomasz M; Nordtug, Trond; Kvæstad, Bjarne; Hansen, Bjørn H; Kristensen, Torstein; Altin, Dag; Olsvik, Pål A (2021)

Toxicology Reports

Can short-term data accurately model long-term environmental exposures? Investigating the multigenerational adaptation potential of Daphnia magna to environmental concentrations of organic ultraviolet filters

Boyd, Aaron; Choi, Jessica; Ren, Grace; How, Zuo Tong; El-Din, Mohamed Gamal; Tierney, Keith B; Blewett, Tamzin A (2023)

Journal of Hazardous Materials

Polystyrene nanoplastics enhance the toxicological effects of DDE in zebrafish (Danio rerio) larvae

Varshney, Shubham; Gora, Adnan H; Kiron, Viswanath; Siriyappagouder, Prabhugouda; Dahle, Dalia; Kögel, Tanja; Ørnsrud, Robin; Olsvik, Pål A (2023)

Science of the Total Environment

Toxicological effects of 6PPD and 6PPD quinone in zebrafish larvae

Varshney, Shubham; Gora, Adnan H; Siriyappagouder, Prabhugouda; Kiron, Viswanath; Olsvik, Pål A; (2022)

Journal of Hazardous Materials

Swimming activity as an indicator of seasonal diapause in the copepod Calanus finmarchicus

Grigor, Jordan J; Freer, Jennifer J; Tarling, Geraint A; Cohen, Jonathan H; Last, Kim S; (2022)

Frontiers in Marine Science

Individual variation in growth and physiology of symbionts in response to temperature

terHorst, Casey P; Coffroth, Mary Alice; (2022)

Ecology and Evolution

The regulation of heart rate following genetic deletion of the ß1 adrenergic receptor in larval zebrafish

Joyce, William; Pan, Yihang K; Garvey, Kayla; Saxena, Vishal; Perry, Steve F; (2022)

Acta Physiologica

Metabolism drives demography in an experimental field test

Schuster, Lukas; Cameron, Hayley; White, Craig R; Marshall, Dustin J; (2021)

Proceedings of the National Academy of Sciences

University of Alabama at Birmingham Nathan Shock Center: comparative energetics of aging

Austad, Steven N; Buford, Thomas W; Allison, David B; Ballinger, Scott; Brown, Andrew W; Carter, Christy S; Darley-Usmar, Victor M; Hartman, John L; Nagy, Timothy R; Smith, Daniel L; (2021)

GeroScience

Role of the cardiovascular system in ammonia excretion in early life stages of zebrafish (Danio rerio)

Wang, Yadong; Pasparakis, Christina; Grosell, Martin; (2021)

American Journal of Physiology-Regulatory, Integrative and Comparative Physiology

Effects of mine tailing exposure on early life stages of cod (Gadus morhua) and haddock (Melanogrammus aeglefinus)

Farkas, Julia; Nordtug, Trond; Svendheim, Linn H; Amico, Elettra D; Davies, Emlyn J; Ciesielski, Tomasz; Jenssen, Bjørn Munro; Kristensen, Torstein; Olsvik, Pål A; Hansen, Bjørn Henrik; (2021)

Environmental Research

An integrated in vivo and in silico analysis of the metabolism disrupting effects of CPI-613 on embryo-larval zebrafish (Danio rerio)

Hala, David; Faulkner, Patricia; He, Kai; Kamalanathan, Manoj; Brink, Mikeelee; Simons, Kristina; Apaydin, Meltem; Hernout, Beatrice; Petersen, Lene H; Ivanov, Ivan; (2021)

Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology

Effects of marine mine tailing exposure on the development, growth, and lipid accumulation in Calanus finmarchicus

Svendheim, Linn H; Jager, Tjalling; Olsvik, Pål A; Øverjordet, Ida Beathe; Ciesielski, Tomasz M; Nordtug, Trond; Kristensen, Torstein; Hansen, Bjørn Henrik; Kvæstad, Bjarne; Altin, Dag; (2021)

Chemosphere

Does hypoxia-inducible factor 1α play a role in regulating cutaneous oxygen flux in larval zebrafish (Danio rerio)?

Parker, Julian J; Perry, Steve F; (2021)

Journal of Comparative Physiology B

Effects of temperature on hatching and growth performance of embryos and yolk-sac larvae of a threatened estuarine fish: Longfin smelt (Spirinchus thaleichthys)

Yanagitsuru, Yuzo R; Main, Madison A; Lewis, Levi S; Hobbs, James A; Hung, Tien-Chieh; Connon, Richard E; Fangue, Nann A; (2021)

Aquaculture

Respirometry and cutaneous oxygen flux measurements reveal a negligible aerobic cost of ion regulation in larval zebrafish (Danio rerio)

Parker, Julian J; Zimmer, Alex M; Perry, Steve F; (2020)

Journal of Experimental Biology

Physiological condition of Eastern Baltic cod, Gadus morhua, infected with the parasitic nematode Contracaecum osculatum

Ryberg, Marie Plambech; Skov, Peter V; Vendramin, Niccolò; Buchmann, Kurt; Nielsen, Anders; Behrens, Jane W; (2020)

Conservation physiology

Acidification and hypoxia interactively affect metabolism in embryos, but not larvae, of the coastal forage fish Menidia menidia

Schwemmer, TG; Baumann, H; Murray, CS; Molina, AI; Nye, JA; (2020)

Journal of Experimental Biology

Metabolic rate, context‐dependent selection, and the competition‐colonization trade‐off

Pettersen, Amanda K; Hall, Matthew D; White, Craig R; Marshall, Dustin J; (2020)

Evolution Letters

Relationships between the peak hypoxic ventilatory response and critical O2 tension in larval and adult zebrafish (Danio rerio)

Mandic, Milica; Pan, Yihang K; Gilmour, Kathleen M; Perry, Steve F; (2020)

Journal of Experimental Biology

Lifetime eurythermy by seasonally matched thermal performance of developmental stages in an annual aquatic insect

Uno, Hiromi; Stillman, Jonathon H; (2020)

Oecologia

Assessment of a microplate system for measuring individual real-time respiration in small model organisms of aging

Turner, Ashley N; Hoffman, Jessica M; Powell, Mickie L; Sammy, Melissa J; Moellering, Douglas R; Nagy, Tim R; Austad, Steven N; Smith, Daniel L; (2019)

Innovation in Aging

Warm and out of breath: thermal phenotypic plasticity in oxygen supply

Kielland, Øystein Nordeide; Bech, Claus; Einum, Sigurd; (2019)

Functional Ecology

3-ketodihydrosphingosine reductase mutation induces steatosis and hepatic injury in zebrafish

Park, Ki-Hoon; Ye, Zhi-wei; Zhang, Jie; Hammad, Samar M; Townsend, Danyelle M; Rockey, Don C; Kim, Seok-Hyung; (2019)

Scientific reports

Genetic Variation in Metabolic Rate and Correlations with Other Energy Budget Components and Life History in Daphnia magna

Einum, Sigurd; Fossen, Erlend IF; Parry, Victor; Pélabon, Christophe; (2019)

Evolutionary Biology

Species interactions mediate thermal evolution

Tseng, Michelle; Bernhardt, Joey R; Chila, Alexander E; (2019)

Evolutionary Applications

Water-soluble fraction of crude oil affects variability and has transgenerational effects in Daphnia magna

Nikinmaa, Mikko; Suominen, Emilie; Anttila, Katja; (2019)

Aquatic Toxicology

New insights into the biology of Calanus spp. (Copepoda) males in the Arctic

Daase, Malin; Kosobokova, Ksenia; Last, Kim S; Cohen, Jonathan H; Choquet, Marvin; Hatlebakk, Maja; Søreide, Janne E; (2018)

Marine Ecology Progress Series

Survival, metabolic rates and locomotory activities of a groundwater-obligate copepod species under long-term exposures to tetrachloroethylene

Di Lorenzo, Tiziana; Di Marzio, Walter; Piccini, Leonardo; Messana, Giuseppe; Sáenz, Maria; Galassi, Diana; (2018)

ARPHA Conference Abstracts

Effect of Temperature Rising on the Stygobitic Crustacean Species Diacyclops belgicus: Does Global Warming Affect Groundwater Populations?

Di Lorenzo, Tiziana; Galassi, Diana Maria Paola; (2017)

Water

No evidence for thermal transgenerational plasticity in metabolism when minimizing the potential forconfounding effects.

ØN Kielland, C Bech & S Einum (2017)

Proceedings of the Royal Society B

Assessing the morphological and physiological adaptations of the parasitoid wasp Echthrodesis lamorali for survival in an intertidal environment.

CA Owen, J Coetzee, S Van Noort & AD Austin (2017)

Physiological Entomology

Thermal windows and metabolic performance curves in a developing Antarctic fish

Flynn, Erin E; Todgham, Anne E; (2018)

Journal of Comparative Physiology B

Does the cost of development scale allometrically with offspring size?

Pettersen, Amanda K; White, Craig R; Bryson‐Richardson, Robert J; Marshall, Dustin J; (2017)

Functional Ecology

Cardio-respirometry disruption in zebrafish (Danio rerio) embryos exposed to hydraulic fracturing flowback and produced water

Folkerts, Erik J; Blewett, Tamzin A; He, Yuhe; Goss, Greg G; (2017)

Environmental Pollution

Effects of thermal stress and nitrate enrichment on the larval performance of two Caribbean reef corals

Serrano, Xaymara M; Miller, Margaret W; Hendee, James C; Jensen, Brittany A; Gapayao, Justine Z; Pasparakis, Christina; Grosell, Martin; Baker, Andrew C; (2017)

Coral Reefs

Combined effects of oil exposure, temperature and ultraviolet radiation on buoyancy and oxygen consumption of embryonic mahi-mahi, Coryphaena hippurus

Pasparakis, Christina; Sweet, Lauren E; Stieglitz, John D; Benetti, Daniel; Casente, Conrad T; Roberts, Aaron P; Grosell, Martin (2017)

Aquatic Toxicology

Metabolic rate covaries with fitness and the pace of the life history in the field.

AK Pettersen, CR White & DJ Marshall (2016)

Proceedings of the Royal Society B

Negative relationships between population density and metabolic rates are not general.

V Yashchenko, EI Fossen, ØN Kielland & S Einum (2016)

Journal of Animal Ecology

Hypoxia depresses CYP1A induction and enhances DNA damage, buth as minimal effects on antioxidant responses in sheepshead minnow (Cyprinodon variegatus) larvae exposed to dispersed crude oil.

S Dasgupta, RT DiGiulio, BD Drollette, DL Plata, BJ Brownawell & AE McElroy (2016)

Aquatic Toxicology

Effects of Deepwater Horizon crude oil exposure, temperature and developmental stage on oxygen consumption of embryonic and larval mahi-mahi (Coryphaena hippurus).

C Pasparakis, EM Mager, JD Stieglitz, D Benetti & M Grosell (2016)

Aquatic Toxicology

Why does offspring size affect performance? Integrating metabolic scaling with life-history theory.

AK Pettersen, CR White & DJ Marshall (2015)

Proceedings of the Royal Society B